Locus_tag

Microarray Fold Ratio

RNA-Seq Fold Ratio

Gene Name

Product

Common Pathways/Functional Classifications

PA0705

8.48

∞

migA

Alpha-1,6-rhamnosyltransferase

Quorum sensing/Cell wall/LPS/capsule/Putative enzymes

PA0723

4.79

4.94

coaB

Phage coat protein B

Related to phage/Transposon/or Plasmid

PA0745

4.3

2.6

dspL

Enoyl-CoA hydrastase

PA0958

8.36

95.89

oprD

Porin D

Two-component system/beta-Lactam resistance/Transport of small molecules

PA1092

84.71

41.35

fliC

B-type flagellin

Flagella assembly/Two-component system /Motility & Attachment

PA1093

9.35

∞

flaG

Hypothetical protein

Flagella assembly/Hypothetical, unclassified, unknown

PA1094

16.02

∞

fliD

B-type flagellar hook-associated protein

Flagella assembly/Cell wall/LPS/capsule/Motility & Attachment

PA1095

79.61

∞

fliS

B-type flagellar protein

Flagella assembly

PA1135

4.4

3.0

yedU

Molecular chaperone HSP31/glyoxalase

PA1317

4.78

14.80

cyoA

Cytochrome o ubiquinol oxidase subunit II

Metabolic pathway/Energy metabolism

PA1902

5.07

4.95

phzD2

Phenazine biosynthesis protein

Quorum sensing/Phenazine biosynthesis/Secreted Factor

PA1903

4.80

5.17

phzE2

Phenazine biosynthesis protein

Quorum sensing/Phenazine biosynthesis/Secreted Factor

PA1904

4.90

5.09

phzF2

Trans-2,3-dihydro-3-hydroxyanthranilate isomerase

Quorum sensing/Phenazine biosynthesis/Secreted Factor

PA2246

4.3

2.4

bkdR

Bkd operon transcriptional regulator BkrD

PA2329

7.51

10.35

ABC transporter ATP-binding protein

Transport of small molecules

PA2365

5.82

5.84

hsiB3

Hypothetical protein

Biofilm formation/T6SS/Bacterial secretion system

PA2366

8.20

6.36

hsiC3

Uricase

Biofilm formation/T6SS/Bacterial secretion system

PA2367

6.75

8.36

hcp3

Hypothetical protein

Biofilm formation/T6SS/Bacterial secretion system

PA2368

7.51

8.18

hsiF3

Hypothetical protein

T6SS/Hypothetical, unclassified, unknown

PA2385

5.62

20.24

pvdQ

Acyl-homoserine lactone acylase

Pyoverdine synthesis/Adaptation, Protection

PA2393

13.99

17.21

pvdM

Dipeptidase

Pyoverdine synthesis/Central intermediary metabolism

PA2394

13.71

17.97

pvdN

Pyoverdine biosynthesis protein

Pyoverdine synthesis/Adaptation, Protection

PA2395

4.12

34.60

pvdO

Pyoverdine biosynthesis protein

Pyoverdine synthesis/Adaptation, Protection

PA2404

9.09

5.09

fpvH

Hypothetical protein

Membrane protein

PA2405

6.08

7.27

fpvJ

Hypothetical protein

Hypothetical, unclassified, unknown

PA2406

4.56

4.46

fpvK

Hypothetical protein

Hypothetical, unclassified, unknown

PA2407

4.04

5.56

fpvC

Adhesion protein

ABC transporters/Motility & Attachment/Transport of small molecules

PA2444

5.59

5.50

glyA2

Serine hydroxymethyl transferase

Biosynthesis of secondary metabolites/Amino acid biosynthesis and metabolism

PA2445

8.46

8.25

gcvP2

Glycine dehydrogenase

Biosynthesis of secondary metabolites/Amino acid biosynthesis and metabolism/Central intermediary metabolism

PA2564

17.07

30282.00

tam

Trans-aconitate 2-methyltransferase

Hypothetical, unclassified, unknown

PA2688

4.6

3.5

pfeA

Ferric enterobactin receptor

PA4078

5.29

7.94

Probable nonribosomal peptide synthetase

Adaption, protection

PA4142

10.44

9.17

Secretion protein

Protein secretion/export apparatus

PA4144

5.83

7.28

opmK

Hypothetical protein

Two-component system/ beta-Lactam resistance/Protein secretion/export apparatus

PA4205

23.13

98.52

mexG

Hypothetical protein

Quorum sensing/Membrane protein

PA4206

6.64

99.14

mexH

Resistance-nodulation-cell division (RND) efflux membrane fusion protein

Quorum sensing/Transport of small molecules

PA4207

37.76

77.27

mexI

Resistance-nodulation-cell division (RND) efflux transporter

Quorum sensing/Membrane protein/Transport of small molecules

PA4208

15.76

38.10

opmD

Hypothetical protein

Quorum sensing/Membrane protein/Transport of small molecules

PA4468

5.89

6.55

sodM

Superoxide dismutase

Superoxide radicals degradation/Adaptation, protection

PA4470

6.54

6.82

fumC1

Fumarate hydratase

TCA cycle/Energy metabolism

PA4471

5.09

5.72

fagA

Hypothetical protein

Hypothetical, unclassified, unknown

PA4525

125.07

∞

pilA

Type 4 fimbrial protein

Two-component system/Pilin biosynthesis/Motility & Attachment

PA4590

8.23

11.04

Pra

Protein activator

Transport of small molecule/Carbon compound catabolism

PA5180

4.06

6.26

fdhD

Hypothetical protein

Hypothetical, unclassified, unknown

PA5181

11.63

19.35

Oxidoreductase

Putative enzymes

PA5415

4.5

3.3

glyA1

Serine hydroxymethyltransferase