Table 5: Unreliability URatios for genes in the pyoverdine biosynthesis operon.
Locus_tag |
Microarray Ratio |
RNA-Seq Ratio |
URatioCMC-115 |
URatioCMC-097 |
Gene Name |
Product |
PA2390 |
2.22 |
5.07 |
0.97 |
0.99 |
pvdT |
Pyoverdine biosynthesis protein, PvdT |
PA2391 |
2.30 |
7.28 |
0.98 |
1.02 |
opmQ |
Hypothetical protein, OpmH |
PA2392 |
1.37 |
28.76 |
1.55 |
1.92 |
pvdP |
Pyoverdine biosynthesis protein, PvdP |
PA2393 |
13.99 |
17.21 |
1.04 |
1.15 |
Dipeptidase |
|
PA2394 |
13.71 |
17.97 |
0.97 |
0.99 |
pvdN |
Pyoverdine biosynthesis protein, PvdN |
PA2395 |
4.12 |
34.60 |
1.02 |
0.99 |
pvdO |
Pyoverdine biosynthesis protein, PvdO |
PA2396 |
0.71 |
1.63 |
11.00 |
0.99 |
pvdF |
Pyoverdine synthetase F, PvdF |
PA2397 |
1.10 |
0.03 |
103.14 |
0.99 |
pvdE |
Pyoverdine biosynthesis protein, PvdE |
PA2398 |
0.58 |
0.00 |
∞ |
0.99 |
fpvA |
Ferripyoverdine receptor, fpvA |
PA2399 |
0.60 |
0.01 |
39.39 |
0.99 |
pvdD |
Pyoverdine synthetase D, PvdB |
PA2400 |
0.90 |
0.10 |
5.79 |
1.00 |
pvdJ |
Pyoverdine biosynthesis protein PvdJ |