Table 2: Predicting sensitivity of CMS classification and IPS in GSE5851.

 

Cases with wild type KRAS n = 37

Cases with wild type KRAS n = 37

Cases with CMS1/3/4 n = 11

Cases with CMS2 n = 26

 

CMS1/3/4

CMS2

Low IPS

High IPS

Low IPS

High IPS

Low IPS

High IPS

None-DC

7 (63.6)

10 (38.5)

17 (85.0)

0 (0.0)

7 (77.8)

0 (0.0)

10 (90.9)

0 (0.0)

DC

4 (36.4)

16 (61.5)

3 (15.0)

17 (100)

2 (22.2)

2 (100)

1 (9.1)

15 (100)

χ2/P

1.973/0.16

26.732/< 0.001

0.109

18.485/< 0.001

Fisher’s exact probability