Table 1: Donor
CFC number, barcode, and corresponding sequence frequency generated.
|
Fragment 1 |
Fragment 2 |
|||||||||
|
Sample ID |
Clone |
Donor Age |
Barcode sequence |
MLH1 Expression |
Methylated Molecules |
Unmethylated Molecules |
CpG Methylation Ratio |
Methylated Molecules |
Unmethylated Molecules |
CpG Methylation Ratio |
|
BMA01 |
BMA01-C13 |
73 |
ATATCTCAA |
- |
315 |
2175 |
0.145 |
106 |
4706 |
0.023 |
|
BMA01 |
BMA01-C14 |
73 |
ACTAGGTCC |
- |
726 |
1922 |
0.378 |
185 |
4220 |
0.044 |
|
BMA01 |
BMA01-C2 |
73 |
CCACGGCCG |
- |
494 |
1173 |
0.421 |
63 |
1907 |
0.033 |
|
BMA01 |
BMA01-C3 |
73 |
TCCTTAGCT |
- |
2829 |
8051 |
0.351 |
198 |
3721 |
0.053 |
|
BMA01 |
BMA01-C4 |
73 |
GAGACGTAA |
- |
2945 |
13298 |
0.221 |
483 |
2891 |
0.167 |
|
BMA01 |
BMA01-C8 |
73 |
GTTATGTAT |
- |
1400 |
2578 |
0.543 |
289 |
3385 |
0.085 |
|
BMA01 |
BMA01-C1 |
73 |
GTTTACAGT |
+ |
2807 |
8399 |
0.334 |
1118 |
5777 |
0.194 |
|
BMA01 |
BMA01-C11 |
73 |
CAATCCCTC |
+ |
299 |
1710 |
0.175 |
65 |
2599 |
0.025 |
|
BMA01 |
BMA01-C5 |
73 |
ACGGCCCTA |
+ |
1292 |
5065 |
0.255 |
500 |
9305 |
0.054 |
|
BMA01 |
BMA01-C7 |
73 |
TTGCTAGGT |
+ |
1548 |
7087 |
0.218 |
1634 |
6205 |
0.263 |
|
BMA02 |
BMA02-T1C1 |
42 |
GAGTAGGCA |
- |
2810 |
3381 |
0.831 |
139 |
2570 |
0.054 |
|
BMA02 |
BMA02-T1C4 |
42 |
TACGCTGGA |
- |
855 |
978 |
0.874 |
290 |
1092 |
0.266 |
|
BMA02 |
BMA02-T1C6 |
42 |
GGGCCATTG |
- |
171 |
439 |
0.390 |
20 |
374 |
0.053 |
|
BMA02 |
BMA02-T1C8 |
42 |
CGTGTACGC |
- |
254 |
801 |
0.317 |
47 |
846 |
0.056 |
|
BMA02 |
BMA02-T2C7 |
42 |
GACACCGGT |
- |
3751 |
3841 |
0.977 |
60 |
1346 |
0.045 |
|
BMA02 |
BMA02-T2C8 |
42 |
ACCAACCTT |
- |
3883 |
3968 |
0.979 |
52 |
1153 |
0.045 |
|
BMA02 |
BMA02-T3C8 |
42 |
TACAGGTTT |
- |
805 |
2976 |
0.270 |
147 |
2172 |
0.068 |
|
BMA02 |
BMA02-T1C12 |
42 |
GTACTCATG |
+ |
297 |
4544 |
0.065 |
93 |
2114 |
0.044 |
|
BMA02 |
BMA02-T1C9 |
42 |
ACTCCGAGT |
+ |
225 |
779 |
0.289 |
45 |
750 |
0.060 |
|
BMA03 |
BMA03-T1C1 |
47 |
TCTCCACAG |
- |
928 |
7605 |
0.122 |
137 |
4139 |
0.033 |
|
BMA03 |
BMA03-T2C1 |
47 |
TGAGCATGG |
- |
1301 |
6712 |
0.194 |
175 |
5350 |
0.033 |
|
BMA03 |
BMA03-T2C4 |
47 |
CAGAGTGTT |
- |
830 |
6879 |
0.121 |
80 |
3174 |
0.025 |
|
BMA03 |
BMA03-T2C5 |
47 |
AACCGCGTT |
- |
1354 |
7333 |
0.185 |
48 |
2573 |
0.019 |
|
BMA03 |
BMA03-T2C9 |
47 |
TCTAATGTT |
- |
844 |
4334 |
0.195 |
172 |
3073 |
0.056 |
|
BMA03 |
BMA03-T1C5 |
47 |
AACCCAAGA |
+ |
1224 |
5789 |
0.211 |
113 |
3275 |
0.035 |
|
BMA03 |
BMA03-T2C7 |
47 |
TCCTTCTGG |
+ |
6301 |
13041 |
0.483 |
166 |
2503 |
0.066 |
|
BMA04 |
BMA04-C13 |
74 |
GTAGCCTCG |
- |
2233 |
6501 |
0.343 |
516 |
3064 |
0.168 |
|
BMA04 |
BMA04-C14 |
74 |
AATGGCTTA |
- |
11820 |
37208 |
0.318 |
387 |
2595 |
0.149 |
|
BMA04 |
BMA04-C6 |
74 |
TGCCGGATA |
+ |
1609 |
5991 |
0.269 |
429 |
2590 |
0.166 |
|
BMA04 |
BMA04-C7 |
74 |
CCCAAGGTG |
+ |
2063 |
5976 |
0.345 |
474 |
2787 |
0.170 |