Table 1: HV DNA Analyzed in this paper.

HHV Strain/isolate GenBank# Hits density
Type Genus D* D
HHV 1 Simplex strain NC_001806.1 4.3 6.46
isolate KT887224.1 6.14
isolate KF498959.1 5.75
strain GU734771.1 6.48
HHV 2 strain NC_001798.1 4.5 7.19
isolate KR135331.1 6.51
isolate KR135324.1 7.30
strain KF781518.1 6.83
CeHV-1 (virus B) strain NC_004812.1 4.70
isolate KJ566591.1 4.00
GaHV-2 Mardi strain NC_002229.3 4.6
GaHV-3 strain NC_002577.1 3.75
HHV 3 Varicello strain NC_001348.1 5.3 6.08
strain KF811485.1 6.07
isolate JF306641.2 6.03
isolate JN704710.1 6.09
HHV 4 Lympho crypto strain NC_007605.1 7.2 8.15
strain AP015016.1 8.96
HHV 4.2 strain NC_009334.1 6.7 7.97
strain KP735248.1 8.09
HHV 5 Cyto megalo strain NC_006273.2 3.4 4.32
strain KU550090.1 4.43
isolate KU221100.1 4.31
isolate KU221097.1 4.31
CeHV-8 strain NC_006150.1 4.90
HHV 6A Roseolo strain NC_001664.2 8.4 11.70
isolate KP257584.1 11.18
isolate KJ123690.1 11.28
strain KC465951.1 11.27
HHV 6B strain NC_000898.1 8.3 11.04
strain AB021506.1 10.70
HHV 7 strain NC_001716.2 17.6 23.28
strain U43400.1 19.18
MneHV-7 strain NC_030200 21.18
HHV 8 Rhadino strain NC_009333.1 5.5 6.54
clone KF588566.1 6.33
strain JQ619843.1 6.47

The GenBank reference strains of herpesviruses are highlighted with bold, the gray cells highlight the herpesviruses of monkeys and birds. D - Hits density [total hits length in percent of the length of the viral DNA] in whole virus DNA, D*- Hits density in virus genome (2015).