Table 2: Genotyping of HIV sequences using HIV-1 & REGA 2 Automated subtyping Tool (Version 2.0).
|
Sample |
String length (bp) |
Genomic region |
Subtype |
Bootstrap %* |
Support group for BootScan** |
|
TCJ-18 |
956 |
Env |
- |
- |
0.523 |
|
TCJ-18 |
954 |
Gag |
F(F1) |
100 |
1.000 |
|
JAL-25 |
1196 |
Env |
B |
100 |
0.983 |
|
JAL-25 |
1016 |
Gag |
- |
- |
0.702 |
*Only bootstrap values above 70% were considered significant and described.
**Value given by analysis using the boot scan, where the above 0.900 figures are considered significant.